A likely pest is the Eastern tent caterpillar. See the following website for more details. A picture of the web and a caterpillar would help to assess this. See: https://extension.umn.edu/yard-and-garden-insects/eastern-tent-caterpillars The yellow spots do look like caterpillars. Use a hand magnifier and look closely at the spots. Another possibility is scales. The leaves would feel sticky due the honeydew excreted by the scale.

I was able to get a photo of a bug that’s on the fruit now, and a close up of the bumps. (The photos aren’t very clear, I was teetering on a ladder with a strong breeze) The bumps are hard and I can pick them off. They are now green. They are on every leaf, so I’m assuming now they may be normal?  I have wrapped the fruit in maggot wraps and took off a lot of damaged fruit. Thank you.

I was able to get a photo of a bug that’s on the fruit now, and a close up of the bumps. (The photos aren’t very clear, I was teetering on a ladder with a strong breeze) The bumps are hard and I can pick them off. They are now green. They are on every leaf, so I’m assuming now they may be normal?  I have wrapped the fruit in maggot wraps and took off a lot of damaged fruit. Thank you.

I was able to get a photo of a bug that’s on the fruit now, and a close up of the bumps. (The photos aren’t very clear, I was teetering on a ladder with a strong breeze) The bumps are hard and I can pick them off. They are now green. They are on every leaf, so I’m assuming now they may be normal?  I have wrapped the fruit in maggot wraps and took off a lot of damaged fruit. Thank you.

I was able to get a photo of a bug that’s on the fruit now, and a close up of the bumps. (The photos aren’t very clear, I was teetering on a ladder with a strong breeze) The bumps are hard and I can pick them off. They are now green. They are on every leaf, so I’m assuming now they may be normal?  I have wrapped the fruit in maggot wraps and took off a lot of damaged fruit. Thank you.

The bumps are likely galls made by tiny mites. They do not damage the leaves or fruit. The bug is very blurry; since you have wrapped the fruit it will not be a problem. The web could also be a spider. Good luck with your crop!

Another expert suggests that a these bumps may be extrafloral nectaries; the plant is exchanging nectar for defence by the ants. They do not hurt the trees. See: https://www.reddit.com/r/sfwtrees/comments/8n36j2/small_bumps_on_all_dwarf_peach_tree_leaves_tree/ My bug guess: Maybe tarnished plant bug. http://treefruit.wsu.edu/crop-protection/opm/lygus-bugs/